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Services Offered#

We are able to assist with a wide range of data analysis problems, such as:

  • Patterns of gene expression among individuals, tissues, etc.
  • Whether and how gene expression changes in response to experimental stimulus
  • Quantifying the relationships between genetic and phenotypic variation
  • Biomarker discovery
  • Estimation and comparison of rates of sequence evolution

These questions may be addressed with one or more of the following methods:

  • Processing and preliminary analysis of data from Illumina, Pacific Biosciences, and Oxford Nanopore sequencing data
  • Quantification of counts of gene expression from bulk or single cell RNA sequencing, and subsequent analysis of differential gene expression
  • Discovery of single nucleotide variants, small insertion/deletions, and larger structural variation from whole genome, whole exome, or other target capture sequencing
  • Assembly and annotation of gene and genome sequence data
  • Multiple sequence or genome alignment
  • Imputation of genotypes from variant data

We can provide detailed, reproducible analysis tools, intermediate and final analysis output, and publication-quality figures and tables.

Note: we provide data analysis services. If you need to generate sequence data, please contact the Genome Sequencing Core

Last update: January 11, 2024